DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2839 and SFTPA1

DIOPT Version :9

Sequence 1:NP_608540.1 Gene:CG2839 / 33244 FlyBaseID:FBgn0031273 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_001087239.2 Gene:SFTPA1 / 653509 HGNCID:10798 Length:263 Species:Homo sapiens


Alignment Length:152 Identity:41/152 - (26%)
Similarity:70/152 - (46%) Gaps:14/152 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 LEKSLRKALNALQCS-LDTRNVSSKVSLHPEFEKVGSRFFYIERHVKQNWFDAMTK-CREMGGHL 181
            |::.|:..|:..:.. |.||..   :||......||.:.|  ..:.:...|||:.: |...||.:
Human   118 LDEELQATLHDFRHQILQTRGA---LSLQGSIMTVGEKVF--SSNGQSITFDAIQEACARAGGRI 177

  Fly   182 ASPQNEEELHLIS---QKLDTESYWLDLSDLTDHGQYISLVSGSKAPFLKWNKGQP-NRENAQCV 242
            |.|:|.||...|:   :|.:|.:| :.|::....|.: ....|:...:..|.:|:| .|...|||
Human   178 AVPRNPEENEAIASFVKKYNTYAY-VGLTEGPSPGDF-RYSDGTPVNYTNWYRGEPAGRGKEQCV 240

  Fly   243 RV-KGGLYQTFQCDHRVLFICQ 263
            .: ..|.:....|.:..|.||:
Human   241 EMYTDGQWNDRNCLYSRLTICE 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2839NP_608540.1 CLECT 147..263 CDD:214480 32/121 (26%)
SFTPA1NP_001087239.2 Collagen 43..115 CDD:189968
CLECT_collectin_like 151..263 CDD:153061 31/116 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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