DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2839 and Clec10a

DIOPT Version :10

Sequence 1:NP_608540.1 Gene:CG2839 / 33244 FlyBaseID:FBgn0031273 Length:826 Species:Drosophila melanogaster
Sequence 2:XP_008766090.1 Gene:Clec10a / 64195 RGDID:621158 Length:307 Species:Rattus norvegicus


Alignment Length:289 Identity:54/289 - (18%)
Similarity:105/289 - (36%) Gaps:62/289 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 CNVFAENDILQDPLISSYDRLKKLG-EMCLIDILPILENISEQQK----------EGYTANFRIF 71
            ||:.:...:|          |..|| .:.|:.::.::.:.:.|.:          :..|:|.:. 
  Rat    31 CNILSWTHLL----------LFSLGLSLLLLVVISVIGSQNSQLRRDLETLRTTLDNTTSNTKA- 84

  Fly    72 NETQGILDRIEGHQEVNDKQLKALKVKMEGHFMDLHAKMEIKVKKLSLE---------------- 120
             |.|.:..|.:..|    ..:.:|||:::.|..:|.|...:..|..|||                
  Rat    85 -ELQALASRGDSLQ----TGINSLKVEVDDHGQELQAGRGLSQKVASLESTVEKKEQTLRTDLSE 144

  Fly   121 -----KSLRKALNALQCSL-DTRNVSSKVSLHP--EFEKVGSRFFYIERHVKQNWFDAMTKCREM 177
                 :.|.|.|..|.|.| ..:|..|.|:..|  ..|..||.:::.:.  .:.|.:|...|:..
  Rat   145 ITDRVQQLGKDLKTLTCQLASLKNNGSAVACCPLHWMEHEGSCYWFSQS--GKPWPEADKYCQLE 207

  Fly   178 GGHLASPQNEEELHLISQKLDTESYWLDLSDLTDHGQYISLVSGSKAPFLKWNKGQPNR------ 236
            ..:|.:..:..|.:.:...:.:...|:.|:|.....:::......|. |..|...||:.      
  Rat   208 NSNLVAVNSLAEQNFLQTHMGSVVTWIGLTDQNGPWRWVDGTDYEKG-FTHWAPKQPDNWYGHGL 271

  Fly   237 -ENAQCVR-VKGGLYQTFQCDHRVLFICQ 263
             ....|.. ...|.:....|.....::|:
  Rat   272 GGGEDCAHFTSDGRWNDDVCQRPYRWVCE 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2839NP_608540.1 CLECT 147..263 CDD:214480 20/125 (16%)
Clec10aXP_008766090.1 Lectin_N 5..166 CDD:461106 30/150 (20%)
CLECT_DC-SIGN_like 176..301 CDD:153060 21/128 (16%)

Return to query results.
Submit another query.