DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2839 and Clec4n

DIOPT Version :10

Sequence 1:NP_608540.1 Gene:CG2839 / 33244 FlyBaseID:FBgn0031273 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_064385.1 Gene:Clec4n / 56620 MGIID:1861231 Length:209 Species:Mus musculus


Alignment Length:152 Identity:44/152 - (28%)
Similarity:69/152 - (45%) Gaps:24/152 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 NALQCSLDTRNVSSKV--SLHPEFEKVGSRFFYIERHVKQN-WFDAMTKCREMGGHLASPQNEEE 189
            ::|.|..:...||.|:  .....::..||..:.|.  .|:| |..:...|.:||.||.....|.|
Mouse    60 SSLTCFSEGTMVSEKMWGCCPNHWKSFGSSCYLIS--TKENFWSTSEQNCVQMGAHLVVINTEAE 122

  Fly   190 LHLISQKL-DTESYWLDLSDLTDHG--QYISLVSGSKAPFLK----WNKGQPNRENAQCVRV--- 244
            .:.|:|:| ::.||:|.|||...:|  |:|     ...||.:    |:..:||....:||.:   
Mouse   123 QNFITQQLNESLSYFLGLSDPQGNGKWQWI-----DDTPFSQNVRFWHPHEPNLPEERCVSIVYW 182

  Fly   245 ---KGGLYQTFQCDHRVLFICQ 263
               |.|....| ||.:...||:
Mouse   183 NPSKWGWNDVF-CDSKHNSICE 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2839NP_608540.1 CLECT 147..263 CDD:214480 38/129 (29%)
Clec4nNP_064385.1 CLECT_DC-SIGN_like 79..204 CDD:153060 39/133 (29%)

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