DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2839 and Clec4e

DIOPT Version :10

Sequence 1:NP_608540.1 Gene:CG2839 / 33244 FlyBaseID:FBgn0031273 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_001005897.2 Gene:Clec4e / 450223 RGDID:1359298 Length:215 Species:Rattus norvegicus


Alignment Length:126 Identity:31/126 - (24%)
Similarity:55/126 - (43%) Gaps:14/126 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 KKLSLEKSLRKALNALQCSLDTRNVSSKVSLHPEFEKVGSRFFYIERHVKQNWFDAMTKCREMGG 179
            |||...|::::....|:.|...:|.......|  |:  .|.:|:....:  .|..::..|.:||.
  Rat    56 KKLQPHKTIKELSCYLEASGSVKNCCPLNWKH--FQ--SSCYFFSTTTL--TWPSSLNNCSDMGA 114

  Fly   180 HLASPQN-EEELHLISQKLDTESYWLDLSDLTDHGQYISLVSGSKAPFLK----WNKGQPN 235
            ||..... ||:..|...|...:.:::.|:|....||:..:   ...||.:    |:.|:||
  Rat   115 HLVVINTWEEQEFLFRTKPRKKEFYIGLTDQVVEGQWRWV---DDTPFTESLSFWDAGEPN 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2839NP_608540.1 CLECT 147..263 CDD:214480 23/94 (24%)
Clec4eNP_001005897.2 CLECT_DC-SIGN_like 81..208 CDD:153060 24/101 (24%)
Confers specificity for glucose/mannose-type carbohydrates. /evidence=ECO:0000250|UniProtKB:Q9ULY5 170..172 0/1 (0%)

Return to query results.
Submit another query.