DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2839 and Clec3a

DIOPT Version :10

Sequence 1:NP_608540.1 Gene:CG2839 / 33244 FlyBaseID:FBgn0031273 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_001102369.1 Gene:Clec3a / 365009 RGDID:1306295 Length:196 Species:Rattus norvegicus


Alignment Length:209 Identity:50/209 - (23%)
Similarity:87/209 - (41%) Gaps:54/209 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 ILDRIEGHQEVNDKQLKALKVKMEGHFMDLHAKMEIK---------VKKLSLEKSLRKALNALQ- 131
            :||:|..:    ..:.||.|          |:|..:|         |:||..|.:..|.:.||| 
  Rat    16 LLDQISSY----PSRAKARK----------HSKRRVKEKDGDLKSQVEKLWREVNALKEMQALQT 66

  Fly   132 -CSLDTRNVSSKVSLHPEFEKVGSRFFYIERHVKQNWFDAMTKCREMGGHLASPQNEEELHLI-- 193
             |...|:       :|.:        .|:.....:::.:|...|...||.|..|:|.:|::.:  
  Rat    67 VCLRGTK-------VHKK--------CYLASEGLKHYHEANEDCISKGGTLVVPRNSDEINALRD 116

  Fly   194 --SQKL-DTESYWLDLSDLTDHGQYISLVSGSKAPFLKWNKGQPN---RENAQCV---RVKGGLY 249
              .:.| ....:||.::|:...|:::. |.|....||.|::.||:   |||  ||   :...|.:
  Rat   117 YSKRSLPGVNDFWLGINDMVTEGKFLD-VHGFAVSFLNWDRAQPSGGKREN--CVLFSQSAQGKW 178

  Fly   250 QTFQCDHRVLFICQ 263
            ....|.....:||:
  Rat   179 SDEACRSSKRYICE 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2839NP_608540.1 CLECT 147..263 CDD:214480 29/126 (23%)
Clec3aNP_001102369.1 CLECT_tetranectin_like 68..193 CDD:153066 33/143 (23%)

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