DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2839 and Colec12

DIOPT Version :10

Sequence 1:NP_608540.1 Gene:CG2839 / 33244 FlyBaseID:FBgn0031273 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_001020892.1 Gene:Colec12 / 361289 RGDID:735039 Length:742 Species:Rattus norvegicus


Alignment Length:168 Identity:39/168 - (23%)
Similarity:65/168 - (38%) Gaps:29/168 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 VKKLSLEKSLRKALNALQCSLDTRNVSSKVSLHPEFEKVGSRFFYIERHVKQNWFDAMTKCREMG 178
            ::.|:|:.....|.....|....:|.:.|           ..:|.:|:.:.:   ||...|.:..
  Rat   589 MEPLALQNEPTPASEVNGCPPHWKNFTDK-----------CYYFSVEKEIFE---DAKLFCEDKS 639

  Fly   179 GHLASPQNEEELHLI-SQKLDTESYWLDLSDLTDHGQYISLVSGSKAPFLKWNKGQPNR------ 236
            .||....:.||...| .|.:..||:|:.|:|.....:: ..:.|:...:..|..|||:.      
  Rat   640 SHLVFINSREEQQWIKKQTMGRESHWIGLTDSEQESEW-KWLDGTPVDYKNWKAGQPDNWGSGHG 703

  Fly   237 ENAQCV-RVKGGLYQTFQCDHRVLFICQANQNRKKEDE 273
            ....|. .:..|.:..||||....|||:      ||.|
  Rat   704 PGEDCAGLIYAGQWNDFQCDEINNFICE------KERE 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2839NP_608540.1 CLECT 147..263 CDD:214480 29/123 (24%)
Colec12NP_001020892.1 PRK11281 85..>307 CDD:481316
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 439..608 3/18 (17%)
Collagen 455..563 CDD:460189
CLECT_DC-SIGN_like 607..732 CDD:153060 33/145 (23%)
Blue background indicates that the domain is not in the aligned region.

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