DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2839 and Clec4m

DIOPT Version :10

Sequence 1:NP_608540.1 Gene:CG2839 / 33244 FlyBaseID:FBgn0031273 Length:826 Species:Drosophila melanogaster
Sequence 2:XP_038945074.1 Gene:Clec4m / 288378 RGDID:1561466 Length:336 Species:Rattus norvegicus


Alignment Length:280 Identity:67/280 - (23%)
Similarity:119/280 - (42%) Gaps:60/280 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 QDPLISSYDRLKKLGEMCLIDILPILENISEQQKEGYTANFRIFNE----TQGILDRI------- 81
            |.||:........|..:.||.:..:.:..:.|.:| .....:|..|    |..::.||       
  Rat    60 QAPLVLQLLSFLFLAGLLLIILFQVFKTTNTQWQE-EPKQEKILEELNQLTDELMSRIPISQGQN 123

  Fly    82 EGHQEVNDKQLKALKVKMEGHFMDLHAKMEI-KVKKLSLEKSLRKALNALQCSLDTRNVSSKVSL 145
            |..||...:||..|||       :|.:::.: :|:..|:::.:.:.|..|:..|.::..|.:|..
  Rat   124 ESMQEKISEQLTQLKV-------ELLSRIPVFQVQNESMQEKISEQLTQLKAELLSKIPSLQVQD 181

  Fly   146 HPEFEKV--------------------------GSRFFYIERHVKQNWFDAMTKCREMGGHLASP 184
            ..:.||:                          |:.:|..:.  ::||.||:..|:|....|...
  Rat   182 ESKQEKIYQQLVQMKTELLRLCRLCPWDWTFLLGNCYFLSKS--QRNWNDAVRACKEEKAQLVII 244

  Fly   185 QNEEE---LHLISQ-KLDTESYWLDLSDLTDHGQYISLVSGS--KAPFLK-WNKGQPNRENAQ-C 241
            .::||   |.|.|: |..|   |:.||||.:...:: .|.||  .:.|.| ||:|:||....: |
  Rat   245 NSDEEQTFLQLTSKAKGPT---WMGLSDLKNEATWL-WVDGSTLSSRFQKYWNRGEPNNIGEEDC 305

  Fly   242 VRVKGGLYQTFQCDHRVLFI 261
            |...|..:...:|:.:..:|
  Rat   306 VEFAGDGWNDSKCELKKFWI 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2839NP_608540.1 CLECT 147..263 CDD:214480 38/149 (26%)
Clec4mXP_038945074.1 CLECT_DC-SIGN_like 206..328 CDD:153060 36/126 (29%)

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