DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2839 and Sftpa1

DIOPT Version :9

Sequence 1:NP_608540.1 Gene:CG2839 / 33244 FlyBaseID:FBgn0031273 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_075623.2 Gene:Sftpa1 / 20387 MGIID:109518 Length:248 Species:Mus musculus


Alignment Length:152 Identity:41/152 - (26%)
Similarity:70/152 - (46%) Gaps:14/152 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 LEKSLRKALNALQCS-LDTRNVSSKVSLHPEFEKVGSRFFYIERHVKQNWFDAMTK-CREMGGHL 181
            |::.|:.||..::.. |.|..|   :||......||.:.|  ..:.:...||.:.: |...|||:
Mouse   103 LDEELQTALYEIKHQILQTMGV---LSLQGSMLSVGDKVF--STNGQSVNFDTIREMCTRAGGHI 162

  Fly   182 ASPQNEEE---LHLISQKLDTESYWLDLSDLTDHGQYISLVSGSKAPFLKWNKGQP-NRENAQCV 242
            |:|:|.||   :..|::|.:|..| |.:.:....|.: ..:.|:...:..|..|:| .|...:||
Mouse   163 AAPRNPEENEAIASITKKYNTYPY-LGVIEGQTPGDF-HYLDGASVNYTNWYPGEPRGRGKEKCV 225

  Fly   243 RV-KGGLYQTFQCDHRVLFICQ 263
            .: ..|.:....|....|.||:
Mouse   226 EMYTDGKWNDKGCLQYRLAICE 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2839NP_608540.1 CLECT 147..263 CDD:214480 31/121 (26%)
Sftpa1NP_075623.2 Collagen 27..98 CDD:189968
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..100
CLECT_collectin_like 136..248 CDD:153061 30/116 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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