DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2839 and Clec4f

DIOPT Version :10

Sequence 1:NP_608540.1 Gene:CG2839 / 33244 FlyBaseID:FBgn0031273 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_446205.1 Gene:Clec4f / 114598 RGDID:621062 Length:550 Species:Rattus norvegicus


Alignment Length:320 Identity:65/320 - (20%)
Similarity:126/320 - (39%) Gaps:98/320 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 FFSYGSCNVFAENDILQDPLISSYDRLKKLGEMCLIDILPILENISEQQKEGYTANFRIFNETQG 76
            |..:...|:.||...::       |.:::.||. :..:...||.::.|                 
  Rat   248 FLQHSMDNISAEIQAMR-------DGMQRAGEE-MTSLKKDLETLTAQ----------------- 287

  Fly    77 ILDRIEGHQEVNDKQLKALKVKMEGHFMDLHAKMEI---KVKKLS-------------------- 118
             :....||.|..|.|::.||.:::. ...|::::|:   |:|..|                    
  Rat   288 -IQNANGHLEQTDTQIQGLKAQLKS-TSSLNSQIEVVNGKLKDSSRELQTLRRDLSDVSALKSNV 350

  Fly   119 --LEKSLRKA---LNALQCSLD-TRNVSSK--------------VSLHPEFEKV----------- 152
              |:.:|:||   :.:|:..|: |:.:::|              |:.|.:.:|.           
  Rat   351 QMLQSNLQKAKAEVQSLKTGLEATKTLAAKIQGQQSDLEALQKAVAAHTQGQKTQNQVLQLIMQD 415

  Fly   153 ----GSRFFYIERHVKQNWFDAMTKCREMGGHLASPQNEEELHLISQKLDTESYWLDLSDLTDHG 213
                ..:|:|..|. |::|.:|...|...|.||||..::||...:.|..:...:|:.|:|....|
  Rat   416 WKYFNGKFYYFSRD-KKSWHEAENFCVSQGAHLASVTSQEEQAFLVQITNAVDHWIGLTDQGTEG 479

  Fly   214 QYISLVSGSKAPFLK----WNKGQP------NRENAQCVRVKGGLYQTFQCDHRVLFICQ 263
            .: ..|.|:...:::    |.||||      |.|...||.:: .::....|.....::|:
  Rat   480 NW-RWVDGTPFDYVQSRRFWRKGQPDNWRHGNGEREDCVHLQ-RMWNDMACGTAYNWVCK 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2839NP_608540.1 CLECT 147..263 CDD:214480 32/140 (23%)
Clec4fNP_446205.1 SMC_prok_B <100..390 CDD:274008 30/168 (18%)
CLECT_DC-SIGN_like 414..538 CDD:153060 32/127 (25%)

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