DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-21Cb and Klra4

DIOPT Version :10

Sequence 1:NP_608539.2 Gene:lectin-21Cb / 33242 FlyBaseID:FBgn0040106 Length:249 Species:Drosophila melanogaster
Sequence 2:XP_063143056.1 Gene:Klra4 / 690020 RGDID:1585190 Length:320 Species:Rattus norvegicus


Alignment Length:183 Identity:43/183 - (23%)
Similarity:70/183 - (38%) Gaps:39/183 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 NKLQPMKSVIPNQSKALLNYLDLHSKLEYLDA--ALQKAINSLQ--CSLKNTKVMSTGKPHPEFQ 133
            |||....|.:.|:|  .||...|.:|....||  ::..::|..|  | |:.|.::.....|...|
  Rat   129 NKLHHNYSTMQNES--YLNEEMLGNKSSECDAYKSVLDSLNRQQNTC-LRLTNIVLDCLQHKGRQ 190

  Fly   134 --------KLGSRYFYIERHVRQNWFDAADKCRRMGGHLATPQDEDELYLIRKQLEARWFWLDIS 190
                    .:...||.::   ::.|.:....|:.....|.|..|||||..::.|:....:|:.:|
  Rat   191 VNVHLFCCGIKCYYFIMD---KKQWKECEQACQGCKLSLLTIDDEDELKFLQLQVTPDSYWIGLS 252

  Fly   191 NLVDKDQYISLATGKEVSYLKWRHGEPKKSSTANCAYLYAGDYYTYQCSDRNF 243
              .|..::.|          .|....|.|         :|.:...|...|.||
  Rat   253 --YDNKKHDS----------AWIDNNPSK---------FALNIKKYYVKDENF 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-21CbNP_608539.2 CLECT 137..247 CDD:153057 24/107 (22%)
Klra4XP_063143056.1 None

Return to query results.
Submit another query.