DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-21Cb and clec11a

DIOPT Version :9

Sequence 1:NP_608539.2 Gene:lectin-21Cb / 33242 FlyBaseID:FBgn0040106 Length:249 Species:Drosophila melanogaster
Sequence 2:XP_696773.2 Gene:clec11a / 568355 ZFINID:ZDB-GENE-130530-861 Length:273 Species:Danio rerio


Alignment Length:228 Identity:48/228 - (21%)
Similarity:93/228 - (40%) Gaps:48/228 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 EGLV---GHTENKLQPMKSVIPNQSKALLNYLDLHSKLEYLDAALQKA-INSLQCSLKNTKVMS- 124
            ||:|   |.|.:.|:|..:...:..::..||  :.|:|..:|.|:.:. :......:|.|:::. 
Zfish    46 EGIVRGRGDTPDILEPEPTTAVSDMESTYNY--ILSRLAAMDQAIHRLNVGQYTLDIKVTQLLEK 108

  Fly   125 -------TGKPHPEFQKL-------------------GSRYFY---IERHVRQNWFDAADKCRRM 160
                   .|......|::                   |.:..|   :...|.:.:.||:.||:..
Zfish   109 VSRLDNRLGDTEDAIQQVSSYCKDNRKEIGRLEGCQKGRKIGYKCVLAYRVYETYADASKKCQER 173

  Fly   161 GGHLATPQDEDE----LYLIRKQLEARW-FWLDISNLVDKDQYISLATGKEVSYLKWR----HGE 216
            ||.:|.|:|..|    ...::......| .||.|::...:..|:...|.: |:|.:||    ..:
Zfish   174 GGRMAMPRDRKEQEALAEYVKSVFHGNWPVWLGINDERSEGLYLFEDTTR-VTYFQWRKHFLSSQ 237

  Fly   217 PKKSSTANCAYLYA--GDYYTYQCSDRNFFICQ 247
            |......||..:.:  ||::...|..|.:::|:
Zfish   238 PDGGKRENCVAMSSDDGDWWDTYCERRMYYLCE 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-21CbNP_608539.2 CLECT 137..247 CDD:153057 29/123 (24%)
clec11aXP_696773.2 CLECT 143..271 CDD:295302 31/129 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.