DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-21Cb and lectin-46Cb

DIOPT Version :9

Sequence 1:NP_608539.2 Gene:lectin-21Cb / 33242 FlyBaseID:FBgn0040106 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001163102.1 Gene:lectin-46Cb / 53522 FlyBaseID:FBgn0040092 Length:322 Species:Drosophila melanogaster


Alignment Length:160 Identity:36/160 - (22%)
Similarity:64/160 - (40%) Gaps:27/160 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 LQKAINSLQCSLKNTKVMSTGKPHPE--FQKLGSRYFYIERHVRQNWFDAADKCRRMG---GHLA 165
            |..|:.:|...|...:::.:|.|.|.  .:::..:.:|.... :.|||.|.:.|.|.|   ..|:
  Fly     4 LLTALVALLSILPRGELLGSGPPCPRRYLRRINGKCYYFSVK-KMNWFGALNNCLRKGLTLADLS 67

  Fly   166 TPQDEDELYLIRKQL-EARWFWLDISNLVDKDQYISLATGKEVSY-------LKWRHG------E 216
            ..:|.|........| ....||...::|..:.::..::.|:.|.|       |...|.      |
  Fly    68 NQRDFDGAIGFLSGLGNTEDFWFGGNDLYHEGRFQYISNGRLVRYYSNYSNVLPLEHSECDDCLE 132

  Fly   217 PKKSSTANCAYLYAGDYYTYQCSDRNFFIC 246
            .:..|..|   :.:.|    .|.:|.:|||
  Fly   133 VRIRSEIN---MVSAD----NCHERQYFIC 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-21CbNP_608539.2 CLECT 137..247 CDD:153057 29/127 (23%)
lectin-46CbNP_001163102.1 CLECT 38..155 CDD:153057 27/124 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22802
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.