DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment lectin-21Cb and Colec11

DIOPT Version :9

Sequence 1:	NP_608539.2	Gene:	lectin-21Cb / 33242	FlyBaseID:	FBgn0040106	Length:	249	Species:	Drosophila melanogaster
Sequence 2:	XP_006240022.1	Gene:	Colec11 / 366588	RGDID:	1309678	Length:	277	Species:	Rattus norvegicus

Alignment Length:	196	Identity:	38/196 - (19%)
Similarity:	76/196 - (38%)	Gaps:	49/196 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly    58 KELLGEIEGLVGHTENKLQPMKSVIPNQSKALLNYLDLHSKLEYLDAALQKAINSLQCSLKNTKV 122
            ::.:||::..|.....:::.:|:.:|:.: |:....:..||:
  Rat   119 RKAIGEMDNQVTQLTTEIKFIKNALPSPA-AVAGVRETESKI----------------------- 159

  Fly   123 MSTGKPHPEFQKLGSRYFYIERHVRQNWFDAADKCRRMGGHLATPQDEDELYLIRKQLE----AR 183
                            |..::...|  :.||...|:..||.|:.|:||....|:...|.    ||
  Rat   160 ----------------YLLVKEEKR--YADAQLSCQGRGGTLSMPKDEAANGLMASYLAQAGLAR 206

  Fly   184 WFWLDISNLVDKDQYISLATGKEVSYLKWRHGEPKKS-STANCAYLYA-GDYYTYQCSDRNFFIC 246
            .| :.|::|..:..::........::.|||.|||..: ...:|..:.| |.:....|....:|:|
  Rat   207 VF-IGINDLEREGAFVYSDRSPMQTFNKWRSGEPNNAYDEEDCVEMVASGGWNDVACHITMYFMC 270

  Fly   247 Q 247
            :
  Rat   271 E 271

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
lectin-21Cb	NP_608539.2	CLECT	137..247	CDD:153057	29/115 (25%)
Colec11	XP_006240022.1	Collagen	40..95	CDD:189968
Colec11	XP_006240022.1	CLECT_collectin_like	157..272	CDD:153061	32/157 (20%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	62	1.000	Domainoid score	I10071
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.910