DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-21Cb and Clec3a

DIOPT Version :9

Sequence 1:NP_608539.2 Gene:lectin-21Cb / 33242 FlyBaseID:FBgn0040106 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001102369.1 Gene:Clec3a / 365009 RGDID:1306295 Length:196 Species:Rattus norvegicus


Alignment Length:169 Identity:41/169 - (24%)
Similarity:75/169 - (44%) Gaps:30/169 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 DLHSKLEYL--DAALQKAINSLQ--CSLKNTKVMSTGKPHPEFQKLGSRYFYIERHVRQNWFDAA 154
            ||.|::|.|  :....|.:.:||  | |:.|||              .:..|:.....:::.:|.
  Rat    43 DLKSQVEKLWREVNALKEMQALQTVC-LRGTKV--------------HKKCYLASEGLKHYHEAN 92

  Fly   155 DKCRRMGGHLATPQDEDELYLIRKQLE-----ARWFWLDISNLVDKDQYISLATGKEVSYLKWRH 214
            :.|...||.|..|::.||:..:|...:     ...|||.|:::|.:.:::.: .|..||:|.|..
  Rat    93 EDCISKGGTLVVPRNSDEINALRDYSKRSLPGVNDFWLGINDMVTEGKFLDV-HGFAVSFLNWDR 156

  Fly   215 GEPKKSSTANCAYLYA----GDYYTYQCSDRNFFICQAV 249
            .:|......||. |::    |.:....|.....:||:.:
  Rat   157 AQPSGGKRENCV-LFSQSAQGKWSDEACRSSKRYICEFI 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-21CbNP_608539.2 CLECT 137..247 CDD:153057 27/118 (23%)
Clec3aNP_001102369.1 CLECT_tetranectin_like 68..193 CDD:153066 33/141 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 54 1.000 Inparanoid score I5345
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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