DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-21Cb and Cd209d

DIOPT Version :10

Sequence 1:NP_608539.2 Gene:lectin-21Cb / 33242 FlyBaseID:FBgn0040106 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001102319.1 Gene:Cd209d / 363856 RGDID:1561104 Length:237 Species:Rattus norvegicus


Alignment Length:254 Identity:56/254 - (22%)
Similarity:92/254 - (36%) Gaps:79/254 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ERLEKRGEFSLVEFDPLLKFIVKNPHKELLGEIEGLVGHTENKLQPMKSVIPNQSKALLNYLDLH 96
            |.|.....:|::......||.:|:           |..:|:....|:  |:|     ||::|.| 
  Rat    19 EYLMSGSRYSIISSRLRTKFGIKS-----------LAEYTKQSHNPL--VLP-----LLSFLFL- 64

  Fly    97 SKLEYLDAALQKAINSLQCSLKNTKVMSTGKPHPEFQKL--------------------GSRYFY 141
                   |.|...|..|...:.:::|..  |.:.|..:|                    ||.||:
  Rat    65 -------AGLLLIILVLVSKVPSSEVQD--KIYQELMQLKTEVHDGLCQPCPRDWTFFNGSCYFF 120

  Fly   142 IERHVRQNWFDAADKCRRMGGHLATPQ-DEDELYLIRKQL--------------EARWFWLDISN 191
            .:.  ::||.::...|:.:|..|...: ||::.:|.:...              ||.|.|:|.|.
  Rat   121 SKS--QRNWHNSITACKELGAQLVIVETDEEQTFLQQTSKTRGPTWMGLSDMHNEATWHWVDGSP 183

  Fly   192 LVDK-DQYISLATGKEVSYLKWRHGEPKKSSTANCAYLYAGDYYTYQCSDRNFFICQAV 249
            |... .||             |..|||......:||......:...:|..|.|:||:.|
  Rat   184 LSPSFAQY-------------WNRGEPNNVGDEDCAEFSGDGWNDLRCDTRIFWICKKV 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-21CbNP_608539.2 CLECT 137..247 CDD:153057 30/125 (24%)
Cd209dNP_001102319.1 CLECT_DC-SIGN_like 106..228 CDD:153060 32/136 (24%)

Return to query results.
Submit another query.