DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-21Cb and Clec4m

DIOPT Version :10

Sequence 1:NP_608539.2 Gene:lectin-21Cb / 33242 FlyBaseID:FBgn0040106 Length:249 Species:Drosophila melanogaster
Sequence 2:XP_038945074.1 Gene:Clec4m / 288378 RGDID:1561466 Length:336 Species:Rattus norvegicus


Alignment Length:240 Identity:53/240 - (22%)
Similarity:80/240 - (33%) Gaps:78/240 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 ELLGEIEGLVGHTENKLQPMKSVIPNQSKALLNYL------------DLHSKLEYLDAALQKAIN 111
            ||:..|....|..|:..:.:...:......||:.:            .:..:|..|.|.|...|.
  Rat   111 ELMSRIPISQGQNESMQEKISEQLTQLKVELLSRIPVFQVQNESMQEKISEQLTQLKAELLSKIP 175

  Fly   112 SLQCSLKNTKVMSTGKPHPEFQK----------------------LGSRYFYIERHVRQNWFDAA 154
            |||       |....|....:|:                      ||:.||..:.  ::||.||.
  Rat   176 SLQ-------VQDESKQEKIYQQLVQMKTELLRLCRLCPWDWTFLLGNCYFLSKS--QRNWNDAV 231

  Fly   155 DKCRRMGGHLA-TPQDEDELYLIRKQL-----------------EARWFWLDISNLVDKDQYISL 201
            ..|:.....|. ...||::.:|   ||                 ||.|.|:|.|.|..:.|    
  Rat   232 RACKEEKAQLVIINSDEEQTFL---QLTSKAKGPTWMGLSDLKNEATWLWVDGSTLSSRFQ---- 289

  Fly   202 ATGKEVSYLKWRHGEPKKSSTANCAYLYAGD-YYTYQCSDRNFFI 245
                  .|  |..|||......:|.. :||| :...:|..:.|:|
  Rat   290 ------KY--WNRGEPNNIGEEDCVE-FAGDGWNDSKCELKKFWI 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-21CbNP_608539.2 CLECT 137..247 CDD:153057 33/128 (26%)
Clec4mXP_038945074.1 CLECT_DC-SIGN_like 206..328 CDD:153060 35/138 (25%)

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