DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-21Cb and Clec4a1

DIOPT Version :9

Sequence 1:NP_608539.2 Gene:lectin-21Cb / 33242 FlyBaseID:FBgn0040106 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_955015.1 Gene:Clec4a1 / 269799 MGIID:3036291 Length:245 Species:Mus musculus


Alignment Length:154 Identity:34/154 - (22%)
Similarity:50/154 - (32%) Gaps:46/154 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 LNYLDLHSKLEYLDAALQKAINSLQCSLKNTKVMSTGKPHPEFQKLGSRYFYIERHVRQNWFDAA 154
            ||:..||....:  ::::..:.|  |..||.|...:             :.|.......:|..:.
Mouse    92 LNHARLHCVKNH--SSVEDKVWS--CCPKNWKPFDS-------------HCYFTSRDTASWSKSE 139

  Fly   155 DKCRRMGGHLATPQDEDELYLIRKQLEAR---------------WFWLDISNLVDKDQYISLATG 204
            :||...|.||...|.::|...|...|..|               |.|      ||:..|...|| 
Mouse   140 EKCSLRGAHLLVIQSQEEQDFITNTLNPRAAYYVGLSDPKGHGQWQW------VDQTPYDQNAT- 197

  Fly   205 KEVSYLKWRHGEPKKSSTANCAYL 228
                  .|...|| ..:|..|..|
Mouse   198 ------SWHSDEP-SGNTEFCVVL 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-21CbNP_608539.2 CLECT 137..247 CDD:153057 25/107 (23%)
Clec4a1NP_955015.1 CLECT_DC-SIGN_like 114..240 CDD:153060 28/128 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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