DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-21Cb and Sftpa1

DIOPT Version :9

Sequence 1:NP_608539.2 Gene:lectin-21Cb / 33242 FlyBaseID:FBgn0040106 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001257574.1 Gene:Sftpa1 / 24773 RGDID:3665 Length:258 Species:Rattus norvegicus


Alignment Length:215 Identity:45/215 - (20%)
Similarity:71/215 - (33%) Gaps:60/215 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 PHKELLGEIEGLVGHTENKLQPMKSVIPNQSKALLNYLDLHSKLEYLDAALQ----KAINSLQCS 116
            |.::.|....|..|...:|.:|.:..:|    ....|||...:.|..:...|    ..:.|||.|
  Rat    80 PGRDGLPGAPGAPGERGDKGEPGERGLP----GFPAYLDEELQTELYEIKHQILQTMGVLSLQGS 140

  Fly   117 LKNT--KVMSTGKPHPEFQKLGSRYFYIERHVRQNWFDAADKCRRMGGHLATPQDEDE------- 172
            :.:.  ||.||......|..:                  .:.|.|.||::|.|:..:|       
  Rat   141 MLSVGDKVFSTNGQSVNFDTI------------------KEMCTRAGGNIAVPRTPEENEAIASI 187

  Fly   173 ---------LYLIRKQLEARWFWLDISNLVDKDQYISLATGKEVSYLKWRHGEPKKSSTANCAYL 228
                     |.:|..|....:.:||               |..|:|..|..|||:......|..:
  Rat   188 AKKYNNYVYLGMIEDQTPGDFHYLD---------------GASVNYTNWYPGEPRGQGKEKCVEM 237

  Fly   229 YA-GDYYTYQCSDRNFFICQ 247
            |. |.:....|......:|:
  Rat   238 YTDGTWNDRGCLQYRLAVCE 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-21CbNP_608539.2 CLECT 137..247 CDD:153057 23/126 (18%)
Sftpa1NP_001257574.1 Collagen 37..108 CDD:189968 7/31 (23%)
CLECT_collectin_like 146..258 CDD:153061 29/145 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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