DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-21Cb and Mbl1

DIOPT Version :9

Sequence 1:NP_608539.2 Gene:lectin-21Cb / 33242 FlyBaseID:FBgn0040106 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_034905.1 Gene:Mbl1 / 17194 MGIID:96923 Length:239 Species:Mus musculus


Alignment Length:148 Identity:29/148 - (19%)
Similarity:63/148 - (42%) Gaps:13/148 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 ALQKAINSLQCSLK--NTKVMSTGKPHP-EFQKLGSRYFYIERHVRQNWFDAADKCRRMGGHLAT 166
            |:::.:.:::..::  .:|:..|.|.|. ...|...:..::..|.:..:......|..:.|.:|.
Mouse    91 AIEEKLANMEAEIRILKSKLQLTNKLHAFSMGKKSGKKLFVTNHEKMPFSKVKSLCTELQGTVAI 155

  Fly   167 PQDEDELYLIRKQLEARWFWLDISNLVDKDQYISLATGKEVSYLKWRHGEPKK-SSTANCAYLYA 230
            |::.:|...|::......| |.|::...:.|:: ..||..::|..|:..||.. .|..:|..:..
Mouse   156 PRNAEENKAIQEVATGIAF-LGITDEATEGQFM-YVTGGRLTYSNWKKDEPNNHGSGEDCVIILD 218

  Fly   231 GDYYTYQCSDRNFFICQA 248
            ...:       |...|||
Mouse   219 NGLW-------NDISCQA 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-21CbNP_608539.2 CLECT 137..247 CDD:153057 20/110 (18%)
Mbl1NP_034905.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 35..88
Collagen <37..89 CDD:189968
CLECT_collectin_like 127..237 CDD:153061 23/112 (21%)
Calcium-dependent carbohydrate binding. /evidence=ECO:0000250|UniProtKB:P19999 203..211 3/7 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.