DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gsc and MIXL1

DIOPT Version :10

Sequence 1:NP_001137762.2 Gene:Gsc / 33240 FlyBaseID:FBgn0010323 Length:473 Species:Drosophila melanogaster
Sequence 2:NP_001269331.1 Gene:MIXL1 / 83881 HGNCID:13363 Length:240 Species:Homo sapiens


Alignment Length:208 Identity:59/208 - (28%)
Similarity:81/208 - (38%) Gaps:57/208 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   284 AAAQMQAHVSGAA----AGLSGHGHHPHHPH----GHPHHPHLGAHHHGQHHLSHLGHGPPPKRK 340
            |||.:.|..:|..    ||..|....|..|.    |.|..|.              |...|...:
Human    36 AAALLPAPPAGPGPATFAGFLGRDPGPAPPPPASLGSPAPPK--------------GAAAPSASQ 86

  Fly   341 RRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERV--------EVWFKNRRAKWRK 397
            ||.||.|:.|||:.||..|.:|.|||:.|||:||....|.|.|:        :|||:|||||.|:
Human    87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQLLFSPLFQVWFQNRRAKSRR 151

  Fly   398 QKREEQERLRKLQ-----------------------EEQCGSTTNGTTNSSSGTTSSTGNGSLTV 439
            |..:..:.|.:.:                       :..|....||.   ..|.:.|:..|....
Human   152 QSGKSFQPLARPEIILNHCAPGTETKCLKPQLPLEVDVNCLPEPNGV---GGGISDSSSQGQNFE 213

  Fly   440 KC-PGSDHYSAQL 451
            .| |.|:...::|
Human   214 TCSPLSEDIGSKL 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GscNP_001137762.2 Homeodomain 341..397 CDD:459649 31/63 (49%)
MIXL1NP_001269331.1 Homeodomain 87..151 CDD:459649 31/63 (49%)

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