Protein Alignment Gsc and HB40

DIOPT Version :10

• Sequence 1: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Sequence 2: NP_001329011.1
• Gene: HB40 / 829827
• AraportID: AT4G36740
• Length: 217
• Species: Arabidopsis thaliana
• Alignment Length: 144
• Identity: 34/144 - (23%)
• Similarity: 60/144 - (41%)
• Gaps: 49/144 - (34%)

  Fly   331 LGHGPPPKRKRR----------------HRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDL 379
            :|....|||:|:                .:...|:||:..||.:|...|..:...:::||.::.|
plant    28 VGEVKQPKRRRKKTKGSVASADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGL 92

  Fly   380 KEERVEVWFKNRRAKWRKQKREEQ--------------------------------ER-LRKLQE 411
            ...:|.|||:||||:|:.::.||:                                || :::|.|
plant    93 DPRQVAVWFQNRRARWKNKRLEEEYNKLKNSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRLAE 157

  Fly   412 EQCGSTTNGTTNSS 425
            ...|.::|...:||
plant   158 RVEGGSSNSPISSS 171

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gsc	NP_001137762.2	Homeodomain	341..397	CDD:459649	20/71 (28%)
HB40	NP_001329011.1	HOX	56..109	CDD:197696	18/52 (35%)