Protein Alignment Gsc and HDG1

DIOPT Version :10

• Sequence 1: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Sequence 2: NP_191674.1
• Gene: HDG1 / 825287
• AraportID: AT3G61150
• Length: 808
• Species: Arabidopsis thaliana
• Alignment Length: 288
• Identity: 60/288 - (20%)
• Similarity: 97/288 - (33%)
• Gaps: 123/288 - (42%)

  Fly   157 GAAAASLFT------------IDSILGSRQQGGGTAPSQGSHISSNGNQNGLTSNGISLGLKRSG 209
            ||.|:.|.:            :|::|||    ...||||....||:|...||.:||   .:.|:|
plant    10 GAGASKLLSDAPYNNHFSFSAVDTMLGS----AAIAPSQSLPFSSSGLSLGLQTNG---EMSRNG 67

  Fly   210 AESPASPNSNSSSSAAASPIRPQRVPAMLQHPGLHLGHLAAAAASGFAASPSDFLVAYPNFYPNY 274
            ....::.:..||        |.:.|.:..:...       |.|.||.....||
plant    68 EIMESNVSRKSS--------RGEDVESRSESDN-------AEAVSGDDLDTSD------------ 105

  Fly   275 MHAAAVAHVAAAQMQAHVSGAAAGLSGHGHHPHHPHGHPHHPHLGAHHHGQHHLSHLGHGPPPKR 339
                                                                       .|..|:
plant   106 -----------------------------------------------------------RPLKKK 111

  Fly   340 KRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKWRKQ------ 398
            ||.||  .|.:|::.||:.|.:..:||...|..|:.:::|...:|:.||:|||.:.:.|
plant   112 KRYHR--HTPKQIQDLESVFKECAHPDEKQRLDLSRRLNLDPRQVKFWFQNRRTQMKTQIERHEN 174

  Fly   399 --KREEQERLR--------KLQEEQCGS 416
              .|:|.::||        .::...||:
plant   175 ALLRQENDKLRAENMSVREAMRNPMCGN 202

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gsc	NP_001137762.2	Homeodomain	341..397	CDD:459649	19/55 (35%)
HDG1	NP_191674.1	COG5576	69..185	CDD:227863	35/203 (17%)
		Homeodomain	111..166	CDD:459649	20/56 (36%)
		START_ArGLABRA2_like	314..537	CDD:176884