Protein Alignment Gsc and ldb3a

DIOPT Version :9

• Sequence 1: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Sequence 2: XP_021336348.1
• Gene: ldb3a / 794339
• ZFINID: ZDB-GENE-040121-6
• Length: 746
• Species: Danio rerio
• Alignment Length: 90
• Identity: 24/90 - (26%)
• Similarity: 33/90 - (36%)
• Gaps: 24/90 - (26%)

  Fly    27 PPSKAKFKITVV-----STPSPSPP----PTPPPAGSMLAQMVETNSPP----AGYTLKRSPS-- 76
            ||.|.....|::     :.|:|:||    |.|||.....|....:|.||    ..:..|..||
Zfish   437 PPPKVVSTATIMPASYPAGPAPAPPMVHKPAPPPPAPPAAPASSSNRPPWVTDDNFAQKFDPSKP 501

  Fly    77 ---------DLGEQQQPPRQISRSP 92
                     .|.:...||..|..:|
Zfish   502 TPNTNIKVQPLPQAAPPPPSIISNP 526

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gsc	NP_001137762.2	Homeobox	343..396	CDD:278475
ldb3a	XP_021336348.1	PDZ_signaling	13..82	CDD:238492
		DUF4749	149..239	CDD:318205
		LIM1_ZASP_Cypher	570..621	CDD:188838
		LIM2_Enigma_like	629..680	CDD:188748
		LIM3_ZASP_Cypher	688..742	CDD:188844

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R6207
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.030