DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gsc and DRGX

DIOPT Version :10

Sequence 1:NP_001137762.2 Gene:Gsc / 33240 FlyBaseID:FBgn0010323 Length:473 Species:Drosophila melanogaster
Sequence 2:XP_011538391.1 Gene:DRGX / 644168 HGNCID:21536 Length:298 Species:Homo sapiens


Alignment Length:220 Identity:64/220 - (29%)
Similarity:84/220 - (38%) Gaps:74/220 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 PHL-GAHHHGQHHLSHLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDL 379
            |.| |....|.|.......|...:::||:||.||.:|||.|||.|.:||||||..||:||:|::|
Human     8 PQLEGTATFGNHSSGDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINL 72

  Fly   380 KEERVE-----------------------------------VWFKNRRAKWRKQKREEQERLRKL 409
            .|.||:                                   |||:||||||||.:|...::....
Human    73 TEARVQLANSCLKTELQIEINDTIIEHSEVEDHNFSLKGARVWFQNRRAKWRKTERGASDQEPGA 137

  Fly   410 QEEQCGSTTNGTTNSSS--------------------GTTSSTGNGSLTVKC-PG----SDHYSA 449
            :|.....|.....|.:|                    |.|.... |.....| ||    :..|:.
Human   138 KEPMAEVTPPPVRNINSPPPGDQARSKKEALEAQQSLGRTVGPA-GPFFPSCLPGTLLNTATYAQ 201

  Fly   450 QLVHIKS------------DPNGYS 462
            .|.|:.|            ||.|.|
Human   202 ALSHVASLKGGPLCSCCVPDPMGLS 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GscNP_001137762.2 Homeodomain 341..397 CDD:459649 37/90 (41%)
DRGXXP_011538391.1 Homeodomain 34..125 CDD:459649 37/90 (41%)
OAR 236..253 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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