| Sequence 1: | NP_001137762.2 | Gene: | Gsc / 33240 | FlyBaseID: | FBgn0010323 | Length: | 473 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006501801.1 | Gene: | Pdlim5 / 56376 | MGIID: | 1927489 | Length: | 734 | Species: | Mus musculus |
| Alignment Length: | 325 | Identity: | 68/325 - (20%) |
|---|---|---|---|
| Similarity: | 117/325 - (36%) | Gaps: | 87/325 - (26%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 20 PSTTPDIPPSKAKFKITVVSTPSPSPPPTPPPAGSMLAQMVET-NSPPAGYTLKRSPSDLGEQQQ 83
Fly 84 PPRQISRSPGNTAAYHLTTAMLLNSQQCG---YLGQRLQSVLQQQHAQHQQSQSQTPS-SDDGSQ 144
Fly 145 SGVTILEEERRGGAAAASLFTIDSILGSRQQGG--GTAP---------------SQGSHISSNGN 192
Fly 193 ---------------QNGLT-SNGISLGLKRSGAES-PASPNSNSSS----SAAASPIR----PQ 232
Fly 233 RVPAMLQ-HPGLHLGHLAAAAASGFAASPSDFLVA------YPNFYPNYMHAAAVAHVAAAQMQA 290
Fly 291 290 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Gsc | NP_001137762.2 | Homeobox | 343..396 | CDD:278475 | |
| Pdlim5 | XP_006501801.1 | PDZ_signaling | 10..82 | CDD:238492 | |
| PHA03307 | 150..>540 | CDD:223039 | 53/275 (19%) | ||
| DUF4749 | 214..315 | CDD:374237 | 21/111 (19%) | ||
| LIM1_ENH | 558..609 | CDD:188837 | |||
| LIM2_ENH | 617..668 | CDD:188841 | |||
| LIM3_ENH | 676..730 | CDD:188843 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R6207 |
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.030 | |||||