DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gsc and PRRX1

DIOPT Version :10

Sequence 1:NP_001137762.2 Gene:Gsc / 33240 FlyBaseID:FBgn0010323 Length:473 Species:Drosophila melanogaster
Sequence 2:NP_073207.1 Gene:PRRX1 / 5396 HGNCID:9142 Length:245 Species:Homo sapiens


Alignment Length:175 Identity:60/175 - (34%)
Similarity:79/175 - (45%) Gaps:46/175 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 GHL--AAAAASGFAASPS--DFLVAYPNFYPNYMHAAAVAH---------VAAAQMQAHVSGA-- 295
            ||:  ...|..|...||.  |.|.|..||        :|:|         :.|||...:|..|  
Human     6 GHVLERQPALGGRLDSPGNLDTLQAKKNF--------SVSHLLDLEEAGDMVAAQADENVGEAGR 62

  Fly   296 ----AAGLSGHGHHPHHPHGHPHHPHLGAHHHGQHHLSHLGHGPPPKRK-RRHRTIFTEEQLEQL 355
                :.||:.....|                  |.....|......||| ||:||.|...||:.|
Human    63 SLLESPGLTSGSDTP------------------QQDNDQLNSEEKKKRKQRRNRTTFNSSQLQAL 109

  Fly   356 EATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKWRKQKR 400
            |..|::|||||..:||.||.:|:|.|.||:|||:|||||:|:.:|
Human   110 ERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNER 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GscNP_001137762.2 Homeodomain 341..397 CDD:459649 32/55 (58%)
PRRX1NP_073207.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 4/15 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..103 13/57 (23%)
Homeodomain 99..151 CDD:459649 29/51 (57%)
OAR 219..235 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 222..235
Blue background indicates that the domain is not in the aligned region.

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