DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gsc and PITX1

DIOPT Version :9

Sequence 1:NP_001137762.2 Gene:Gsc / 33240 FlyBaseID:FBgn0010323 Length:473 Species:Drosophila melanogaster
Sequence 2:NP_002644.4 Gene:PITX1 / 5307 HGNCID:9004 Length:314 Species:Homo sapiens


Alignment Length:133 Identity:53/133 - (39%)
Similarity:68/133 - (51%) Gaps:33/133 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   332 GHGPPPKRK--RRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAK 394
            |...|.|:|  ||.||.||.:||::|||||.:..|||:.:||::|:..:|.|.||.|||||||||
Human    79 GADDPAKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAK 143

  Fly   395 WRKQKREEQERLRKLQEEQCGSTTNGTTNSSSGTTSSTGNGSLTVKCPGSDHYSAQLVHIKSDPN 459
            |||::|.:|..|.|          .|.....||...           |..|.|:|          
Human   144 WRKRERNQQLDLCK----------GGYVPQFSGLVQ-----------PYEDVYAA---------- 177

  Fly   460 GYS 462
            |||
Human   178 GYS 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GscNP_001137762.2 Homeobox 343..396 CDD:278475 30/52 (58%)
PITX1NP_002644.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..103 12/23 (52%)
COG5576 36..>146 CDD:227863 37/66 (56%)
Homeobox 93..146 CDD:395001 31/52 (60%)
Interaction with PIT-1. /evidence=ECO:0000250 147..279 14/65 (22%)
OAR 276..293 CDD:397759
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 280..293
Nuclear localization signal. /evidence=ECO:0000255 286..290
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6207
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

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