DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gsc and PRRX2

DIOPT Version :10

Sequence 1:NP_001137762.2 Gene:Gsc / 33240 FlyBaseID:FBgn0010323 Length:473 Species:Drosophila melanogaster
Sequence 2:NP_057391.1 Gene:PRRX2 / 51450 HGNCID:21338 Length:253 Species:Homo sapiens


Alignment Length:153 Identity:57/153 - (37%)
Similarity:75/153 - (49%) Gaps:22/153 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 AASPSDFLVAYPNFYPNYMHAAAVAHVAAAQMQAHVSGAAAGLSGHGHHPHHPHGHPHHPHLGAH 321
            |..|.|...|..||  :..|...:..||||...|...||.|         ....|....|..|: 
Human    25 ALGPGDCAQARKNF--SVSHLLDLEEVAAAGRLAARPGARA---------EAREGAAREPSGGS- 77

  Fly   322 HHGQHHLSHLGHGPPP---------KRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKV 377
             .|.......|..|.|         |::||:||.|...||:.||..|::|||||..:||:||.:|
Human    78 -SGSEAAPQDGECPSPGRGSAAKRKKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRV 141

  Fly   378 DLKEERVEVWFKNRRAKWRKQKR 400
            :|.|.||:|||:|||||:|:.:|
Human   142 NLSEARVQVWFQNRRAKFRRNER 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GscNP_001137762.2 Homeodomain 341..397 CDD:459649 32/55 (58%)
PRRX2NP_057391.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33 3/7 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 55..113 17/68 (25%)
Homeodomain 109..161 CDD:459649 29/51 (57%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 230..243
Blue background indicates that the domain is not in the aligned region.

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