Protein Alignment Gsc and Rhox8

DIOPT Version :10

• Sequence 1: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Sequence 2: NP_001020947.1
• Gene: Rhox8 / 503423
• RGDID: 1561047
• Length: 178
• Species: Rattus norvegicus
• Alignment Length: 92
• Identity: 36/92 - (39%)
• Similarity: 46/92 - (50%)
• Gaps: 18/92 - (19%)

  Fly   306 PHHPHGHPHHPHLGAHHHGQHHLSHLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLR 370
            |....||...|.|                |....:.|||  |||.||::||..|::.|||....|
  Rat   101 PGSTKGHQASPRL----------------PGQLSRNRHR--FTEFQLQELERIFERNHYPSAAAR 147

  Fly   371 EQLALKVDLKEERVEVWFKNRRAKWRK 397
            .:||..:.:.|.|||.|||:||||:||
  Rat   148 RELARWIGVTESRVENWFKSRRAKYRK 174

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gsc	NP_001137762.2	Homeodomain	341..397	CDD:459649	28/55 (51%)
Rhox8	NP_001020947.1	Homeodomain	119..174	CDD:459649	28/56 (50%)