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Protein Alignment Gsc and hbn
DIOPT Version :9
Sequence 1: | NP_001137762.2 |
Gene: | Gsc / 33240 |
FlyBaseID: | FBgn0010323 |
Length: | 473 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_788420.1 |
Gene: | hbn / 47894 |
FlyBaseID: | FBgn0008636 |
Length: | 409 |
Species: | Drosophila melanogaster |
Alignment Length: | 171 |
Identity: | 63/171 - (36%) |
Similarity: | 75/171 - (43%) |
Gaps: | 67/171 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 305 HPHHPHGHPHHPHLGAHHH-----GQHHLSHL--------------------------------- 331
||| ||||||.| |.| |.:||||.
Fly 62 HPH--HGHPHHIH---HLHSSNSNGSNHLSHQQQQQHSQQQHHSQQQQQQQQLQVQAKREDSPTN 121
Fly 332 -------------------GHG----PPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQL 373
||. ..|::.||.||.||..||.|||..|:||.||||..||.|
Fly 122 TDGGLDVDNDDELSSSLNNGHDLSDMERPRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDL 186
Fly 374 ALKVDLKEERVEVWFKNRRAKWRK-QKREEQERLRKLQEEQ 413
|:::||.|.||:|||:|||||||| :|...|::...|..||
Fly 187 AMRLDLSEARVQVWFQNRRAKWRKREKFMNQDKAGYLLPEQ 227
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
55 |
1.000 |
Domainoid score |
I4097 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000011 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR24329 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
4 | 4.010 |
|
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