DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Gsc and Poxm

DIOPT Version :9

Sequence 1:	NP_001137762.2	Gene:	Gsc / 33240	FlyBaseID:	FBgn0010323	Length:	473	Species:	Drosophila melanogaster
Sequence 2:	NP_001036687.1	Gene:	Poxm / 40990	FlyBaseID:	FBgn0003129	Length:	370	Species:	Drosophila melanogaster

Alignment Length:	307	Identity:	73/307 - (23%)
Similarity:	102/307 - (33%)	Gaps:	118/307 - (38%)

- Green bases have known domain annotations that are detailed below.

  Fly   127 AQHQQSQSQTPSSDDGSQSGVT-------ILEEERRGGAAAA-------------------SLFT 165
            |::.::.|..|.:..||:..||       |.|.::|.....|                   |:.:
  Fly    63 ARYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVPSVSS 127

  Fly   166 IDSILGSR------QQGGGT-----APSQGSHISSNGNQNGLT--SNGI---SLGLKRSGAESPA 214
            |..||.::      |...||     :.|.|..:||||.||..|  ||.|   :||....|...|.
  Fly   128 ISRILRNKLGSLGHQHTPGTVMGSGSSSGGGSVSSNGGQNNGTSASNNINLSNLGNPGGGPHHPH 192

  Fly   215 SPNSNSSSSAAA------------------------------------SPIRPQ------RVPAM 237
            ..:.:.|::|||                                    ||..||      .||
  Fly   193 HHHHHQSAAAAASAHHVHAHAHAHAHLYNSIYQPYSAAAAYSMKTPCGSPSPPQGAGGQGSVP-- 255

  Fly   238 LQHPGLHLGHLAAAAASGF---AASPSDFLVAY----------------------PNFYPNYMHA 277
              ||. .|..:|||||:..   :.|.||.|..:                      ....|..|..
  Fly   256 --HPH-QLRSVAAAAAAAHWPSSHSVSDILAHHQAVALRASCQVGVGVGGMGGMGSTVSPLPMTP 317

  Fly   278 AAVAHVAAAQMQAHVSGAAAGLSGHGHHPHHPHGHPHHPHLGAHHHG 324
            :.||..|..|......|.|...|.:.::.:..:|..|| |   ||||
  Fly   318 SPVAGTAGGQPLLDCEGGAGQQSPYNYYMYFQNGGMHH-H---HHHG 360

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Gsc	NP_001137762.2	Homeobox	343..396	CDD:278475
Poxm	NP_001036687.1	PAX	10..133	CDD:128645	14/69 (20%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45450889
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930