Protein Alignment Gsc and bcd

DIOPT Version :10

• Sequence 1: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Sequence 2: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Alignment Length: 213
• Identity: 58/213 - (27%)
• Similarity: 76/213 - (35%)
• Gaps: 80/213 - (37%)

  Fly   302 HGH-HPHHPHGHPHHPHLGAHHHGQHHLSHLGHGPP----------------------------- 336
            |.| || |||.|| |||...|.|.||....|   ||
  Fly    17 HTHTHP-HPHSHP-HPHSHPHPHHQHPQLQL---PPQFRNPFDLLFDERTGAINYNYIRPYLPNQ 76

  Fly   337 -PK----------------RKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERV 384
             ||                |.||.||.||..|:.:||..|.:..|........|:.|:.|...:|
  Fly    77 MPKPDVFPSEELPDSLVMRRPRRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQV 141

  Fly   385 EVWFKNRRAKWRKQKREEQERLRK-----------------LQEEQC--GSTTNGTTNSSSGTTS 430
            ::||||||.:.:.|..:.:::..:                 ||....  |:|.|..|.|   .|.
  Fly   142 KIWFKNRRRRHKIQSDQHKDQSYEGMPLSPGMKQSDGDPPSLQTLSLGGGATPNALTPS---PTP 203

  Fly   431 STGNGSLTVKCPGSDHYS 448
            ||....:|      :|||
  Fly   204 STPTAHMT------EHYS 215

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gsc	NP_001137762.2	Homeodomain	341..397	CDD:459649	21/55 (38%)
bcd	NP_788587.1	Homeodomain	106..153	CDD:459649	15/46 (33%)