DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gsc and mix1

DIOPT Version :10

Sequence 1:NP_001137762.2 Gene:Gsc / 33240 FlyBaseID:FBgn0010323 Length:473 Species:Drosophila melanogaster
Sequence 2:NP_988848.1 Gene:mix1 / 394439 XenbaseID:XB-GENE-485898 Length:357 Species:Xenopus tropicalis


Alignment Length:62 Identity:31/62 - (50%)
Similarity:42/62 - (67%) Gaps:0/62 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   337 PKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKWRKQ 398
            |..:||.||.||:.||:.||..|....|||:..||:||..:.:.|.|::|||:|||||.|:|
 Frog    84 PASQRRKRTFFTQAQLDILEQFFQTNMYPDIHHREELARHIYIPESRIQVWFQNRRAKVRRQ 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GscNP_001137762.2 Homeodomain 341..397 CDD:459649 28/55 (51%)
mix1NP_988848.1 Homeodomain 88..144 CDD:459649 28/55 (51%)

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