DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gsc and eyg

DIOPT Version :10

Sequence 1:NP_001137762.2 Gene:Gsc / 33240 FlyBaseID:FBgn0010323 Length:473 Species:Drosophila melanogaster
Sequence 2:NP_524042.2 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster


Alignment Length:486 Identity:127/486 - (26%)
Similarity:182/486 - (37%) Gaps:107/486 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GGGGTTTTTPSTTPDIPPSKAKFKITVVSTPSPSPPPTPPPAGSMLAQMVETNSPPAGYTLKRSP 75
            ||||.|:|:| |:..|||...         ...|....|..||.           |.|.||....
  Fly    74 GGGGATSTSP-TSVQIPPGFG---------GGGSTGGIPHGAGG-----------PTGSTLNTLM 117

  Fly    76 SDLGEQQQPPRQISRSPGNTAAYHLTTAMLLNSQQCGYLGQRLQSVLQQQHAQHQQSQSQTPSSD 140
            |     |....:.||. |....|.:...||  :|| |.:.:.|.|:.........:.:..||:. 
  Fly   118 S-----QHRLLEFSRF-GGLRGYDIAQHML--TQQ-GAVSKLLGSLRPPGLIGGSKPKVATPTV- 172

  Fly   141 DGSQSGVTILEEERRGGAAAASLFTIDSILGSRQQGGGTAPSQGSHISSNGNQNGLTSNGISLGL 205
                  |:.:|:.:|......:....:.::........||||..|               |:..|
  Fly   173 ------VSKIEQYKRENPTIFAWEIRERLISEGVCTNATAPSVSS---------------INRIL 216

  Fly   206 KRSGAESPASPNSNSSSSAAASPIRPQRVPAMLQHP-GLHLGHLAAAAASGFAASPSD-----FL 264
            :...||..|:..:.:::.....|      |   .|| |....|.|.....|....|..     :.
  Fly   217 RNRAAERVATEFARTAAYGLYPP------P---PHPYGSFTWHPAGNVPGGQGVPPPPPPSALWS 272

  Fly   265 VAYP---NFYPNYMHAAAVAHVAAAQMQAHVSGAAAGLSGHGHHPHHPHGHPHHPHLGAHH---- 322
            ||.|   |..|:...|..|: ...:...||:....||.:        |......|..|:|.    
  Fly   273 VAAPTLANLPPSAASAVPVS-TCGSLSSAHLMAGGAGGT--------PTNRAISPGSGSHDTLES 328

  Fly   323 -HGQHHL--SHLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERV 384
             ....|:  .:|.....|| .||:||.|:.||||:||..|||:|||.|..||:|:.:..|.|.||
  Fly   329 ADENRHIDSDYLDDDDEPK-FRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEARV 392

  Fly   385 EVWFKNRRAKWRKQ------KREEQERLRKLQEEQCGSTTNGTTNSSSGTTSSTGNGSLTVKCPG 443
            :|||.|||||||:.      ||:.......|..:|.......:...|:.:::||......|..|.
  Fly   393 QVWFSNRRAKWRRHQRMNLLKRQRSSPANPLHSQQSNDAPASSPTPSNHSSASTSAPVAPVPPPQ 457

  Fly   444 ------SDHYSAQ------LVH-IKSDPNGY 461
                  .|| |.|      |:| :...|.|:
  Fly   458 QPLPLCGDH-SPQGPPPSVLLHPLHGPPGGH 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GscNP_001137762.2 Homeodomain 341..397 CDD:459649 34/55 (62%)
eygNP_524042.2 HTH_ARSR 120..217 CDD:481197 22/122 (18%)
Homeodomain 349..405 CDD:459649 34/55 (62%)

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