Protein Alignment Gsc and exex

DIOPT Version :10

• Sequence 1: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Sequence 2: NP_648164.1
• Gene: exex / 38884
• FlyBaseID: FBgn0041156
• Length: 525
• Species: Drosophila melanogaster
• Alignment Length: 493
• Identity: 119/493 - (24%)
• Similarity: 174/493 - (35%)
• Gaps: 151/493 - (30%)

  Fly     4 SLWTPG---GGGGGTTTTTPSTTPDIPPSKAKFKITVVSTPSPSPPP--TPPPAGSMLAQMVETN 63
            |.:||.   ||...::.|....:..:|       :.|...|..:.||  .|||....|  .||..
  Fly    91 STYTPALSPGGAQDSSQTESGQSSQMP-------LLVAPMPVGTGPPHSHPPPPHPRL--YVEGF 146

  Fly    64 SPP----------AGYTLKRSPSDL---------GEQQQPPRQISRSPGNTAAYHL--------T 101
            .||          ..|.|.|.|..|         |....||  :|..|   ||.||        |
  Fly   147 PPPHHVPHPHPALGTYPLPRLPLMLPANPPGVPSGAAAPPP--VSPQP---AANHLSHSGATMAT 206

  Fly   102 TAMLLNSQQCGYLGQRLQSVLQQQHAQHQQSQSQTPSSDD--------GSQSGVTILEEERRGGA 158
            |.:|..:|........:.::|.:  :|||..:.|....||        ..|:.:..........|
  Fly   207 TTLLPPAQSQPKKSFCIDALLAK--SQHQSGEPQPIIVDDRLAALHYARDQAELNHAFVTASNAA 269

  Fly   159 AAASLFTIDSILGSRQQGGGTAPSQG-SHISSNGNQNGLTSNGISLGLKRSGAESPASPNSNSSS 222
            |||.        .:....||.:..:. ..|..:...:..:.:|:|    ||  |||.|.:.:|..
  Fly   270 AAAQ--------AAASAAGGISEQEALQRIRDSREYDSPSPDGMS----RS--ESPTSSHRSSPP 320

  Fly   223 SAAA----------------------------------SPIRPQRVPAMLQHPGLHLGHLAAAAA 253
            .:..                                  ||||||..|.   :.|.|...|.|...
  Fly   321 ISPGCEDQQQPHGALHPQHLSMRMSDFHDEFKKPIPPHSPIRPQDFPL---YAGGHPYQLLAQGG 382

  Fly   254 SGF--AASPSDFLVAYP---NFYPNYMHAAAVAHVAAAQMQAHVSGAAAGLSGHGHHPHHPHGHP 313
            |.|  ...||...:..|   ||.|:.:....:|.  |..:...:...||              :|
  Fly   383 SAFHRPLDPSGKPIPIPMGHNFMPSQLQFEFLAR--AGMLHHRIPELAA--------------YP 431

  Fly   314 HHPHLGAHHHGQHHLSHLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVD 378
            ||..||                   :.||.||.||.:||.:||..|.:..|.....|.::|..:.
  Fly   432 HHAILG-------------------KTRRPRTAFTSQQLLELEKQFKQNKYLSRPKRFEVASGLM 477

  Fly   379 LKEERVEVWFKNRRAKWRKQKREEQ---ERLRKLQEEQ 413
            |.|.:|::||:|||.||::.|:.:|   ||.:..|::|
  Fly   478 LSETQVKIWFQNRRMKWKRSKKAQQEAKERAKANQQQQ 515

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gsc	NP_001137762.2	Homeodomain	341..397	CDD:459649	24/55 (44%)
exex	NP_648164.1	Homeodomain	440..496	CDD:459649	24/55 (44%)