Protein Alignment Gsc and Phox2b

DIOPT Version :10

• Sequence 1: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Sequence 2: NP_001414175.1
• Gene: Phox2b / 364152
• RGDID: 1560582
• Length: 314
• Species: Rattus norvegicus
• Alignment Length: 163
• Identity: 57/163 - (34%)
• Similarity: 77/163 - (47%)
• Gaps: 39/163 - (23%)

  Fly   312 HPHHPHLGAHH-----HGQHHLSHLGHGPPPKRK-RRHRTIFTEEQLEQLEATFDKTHYPDVVLR 370
            |...|:....:     ||         |...||| ||.||.||..||::||..|.:|||||:..|
  Rat    73 HQSSPYAAVPYKLFTDHG---------GLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTR 128

  Fly   371 EQLALKVDLKEERVEVWFKNRRAKWRKQKR---------------EEQERLRKLQEEQCGSTTNG 420
            |:||||:||.|.||:|||:|||||:|||:|               ::.:..|..:.::..||...
  Rat   129 EELALKIDLTEARVQVWFQNRRAKFRKQERAAAAAAAAAKNGSSGKKSDSSRDDESKEAKSTDPD 193

  Fly   421 TTNS---------SSGTTSSTGNGSLTVKCPGS 444
            :|..         |.|.....|.|......||:
  Rat   194 STGGPGPNPNPTPSCGANGGGGGGPSPAGAPGA 226

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gsc	NP_001137762.2	Homeodomain	341..397	CDD:459649	35/55 (64%)
Phox2b	NP_001414175.1	Homeodomain	99..155	CDD:459649	35/55 (64%)