Protein Alignment Gsc and Gsc2

DIOPT Version :9

• Sequence 1: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Sequence 2: NP_001102316.1
• Gene: Gsc2 / 363831
• RGDID: 1305333
• Length: 214
• Species: Rattus norvegicus
• Alignment Length: 290
• Identity: 89/290 - (30%)
• Similarity: 110/290 - (37%)
• Gaps: 105/290 - (36%)

  Fly   149 ILEEERRGGAAAASLFTIDSILGSRQQGGGTAPSQGSHISSNGNQNGLTSNGISLGLKRS----- 208
            :|.....|.|.|.|       ..|.:..|...|....||.|            ||..:|.
  Rat     6 LLRRPPAGMATAGS-------AASHRDPGRPCPFSIEHILS------------SLPERRPVARPP 51

  Fly   209 ---GAESPASPNSNSSSSAAA--------SP-IRPQRVPAMLQHPGLHLG---HLAAAAASGFAA 258
               |..:||.|:...:.:.||        :| ..|:..|.....|||.||   .||..:.|...|
  Rat    52 QPVGGRNPAEPDEPEAPAPAAPCACCCCCNPRAAPRGTPETASGPGLRLGWPLRLAPESPSPLTA 116

  Fly   259 SPSDFLVAYPNFYPNYMHAAAVAHVAAAQMQAHVSGAAAGLSGHGHHPHHPHGHPHHPHLGAHHH 323
            ..:.                              |.|..|.||.|
  Rat   117 PSTG------------------------------SPALTGTSGPG-------------------- 131

  Fly   324 GQHHLSHLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWF 388
                        |.:|.|||||||:||||:.|||.|.:..||||..||:||:::.|:||||||||
  Rat   132 ------------PQRRTRRHRTIFSEEQLQALEALFVQNQYPDVGTRERLAVRIRLREERVEVWF 184

  Fly   389 KNRRAKWRKQKREEQERL----RKLQEEQC 414
            ||||||||.|||....||    ||..:|.|
  Rat   185 KNRRAKWRHQKRVSSSRLAPGSRKPHKESC 214

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gsc	NP_001137762.2	Homeobox	343..396	CDD:278475	36/52 (69%)
Gsc2	NP_001102316.1	Homeobox	139..193	CDD:395001	37/53 (70%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	91	1.000	Domainoid score	I7508
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000011
OrthoInspector	1	1.000	-	-		otm45360
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.910