DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gsc and CG32532

DIOPT Version :9

Sequence 1:NP_001137762.2 Gene:Gsc / 33240 FlyBaseID:FBgn0010323 Length:473 Species:Drosophila melanogaster
Sequence 2:NP_608318.5 Gene:CG32532 / 32943 FlyBaseID:FBgn0052532 Length:688 Species:Drosophila melanogaster


Alignment Length:589 Identity:133/589 - (22%)
Similarity:190/589 - (32%) Gaps:237/589 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PGGGGGGTTTTTPSTTPDIPPSKAKFKITVVSTPSPSPPPTPPPAGSMLAQMVETNSPPAGYTLK 72
            ||||||.:                  .:.||...|.|                  |:|.|....:
  Fly    85 PGGGGGAS------------------GVVVVGGTSNS------------------NNPAAAQQQQ 113

  Fly    73 RSPSDLGEQQQPPRQISRSPGNTAAYHLTTAMLL------------NSQQC------------GY 113
            :.     :|||..:|..:|.||..:....:|:.|            :|...            |:
  Fly   114 QQ-----QQQQQQQQQQQSGGNNPSNGSNSAVALSLAHPHAHASHAHSSHAHGSHAHALAIAHGH 173

  Fly   114 LGQRLQSVLQQQHAQHQQSQSQTPSSDDGSQSGVTILEEERRGGAAAASLFTIDSILGSRQQGGG 178
            .| .|.||:.||..|.||.|.|........|         ...|...||..........:||...
  Fly   174 HG-LLPSVVPQQQQQQQQQQQQQQQQQQAQQ---------LPPGVGVASPLQQQQQQQQQQQQQQ 228

  Fly   179 TAPSQGSHISSNGN----------QNGLTSNGISLGLKRSGAESPASPNSNSSSSAA-------- 225
            ....|...:.:||.          .||.:|:|...|...:.|.:.|:..:.||||::        
  Fly   229 QQQQQQQQLINNGGVSAGTPTLLIGNGPSSSGAGTGSVSAAAAAAAAAAAASSSSSSLPHVAPHS 293

  Fly   226 --ASP-----------------------------------IRPQRVPAML-------------QH 240
              .||                                   :||..|..:|             ||
  Fly   294 LGLSPQSSADSQQFNIFPAIFSRQLNFSAGGQGGKLSMDELRPNLVGGLLGLQQGLLEDHASMQH 358

  Fly   241 PGL--------------------HLGHLAAAAAS-----------------------GFAASPSD 262
            .|:                    |...|.:.|:|                       ..:::|.|
  Fly   359 GGVGQDTKFMSFQDQRLMGIGGSHENRLLSLASSVQDTRSPITTLEKSSSSSLNHQRKCSSTPED 423

  Fly   263 FLVAYPNF----YPNYMHAAAVAHVAAAQMQAH------------------VSGAAAGLSGHGHH 305
            |...|...    ..:..|....||...:::..|                  :|..:||::..|  
  Fly   424 FSALYSGLPTPGMDSSSHHHTPAHTPPSRLSDHTISAEGAFKKLKPEPNSGLSTVSAGITSPG-- 486

  Fly   306 PHHPHGHPHHPHLGAHHHGQHHLS-HLGHGP-----PPKRKRRHRTIFTEEQLEQLEATFDKTHY 364
                             .|...|| |.||.|     |...:|||||.||:|||.:|||.|.|:||
  Fly   487 -----------------SGLSSLSQHAGHTPTTASCPTPARRRHRTTFTQEQLAELEAAFAKSHY 534

  Fly   365 PDVVLREQLALKVDLKEERVEVWFKNRRAKWRKQKREEQERLRKLQEEQCGSTTNGTTNSSSGTT 429
            ||:..||:||....|.|.|::|||:|||||:|||:::.|:.|.......|    ||...:..|.:
  Fly   535 PDIYCREELARTTKLNEARIQVWFQNRRAKYRKQEKQLQKALAPSVIPSC----NGMMRNIQGYS 595

  Fly   430 SSTG 433
            .|.|
  Fly   596 VSRG 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GscNP_001137762.2 Homeobox 343..396 CDD:278475 32/52 (62%)
CG32532NP_608318.5 Homeobox 513..566 CDD:278475 32/52 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450871
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24329
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.940

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