Protein Alignment Gsc and unc-4

DIOPT Version :10

• Sequence 1: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Sequence 2: NP_573242.2
• Gene: unc-4 / 32757
• FlyBaseID: FBgn0024184
• Length: 588
• Species: Drosophila melanogaster
• Alignment Length: 412
• Identity: 110/412 - (26%)
• Similarity: 164/412 - (39%)
• Gaps: 117/412 - (28%)

  Fly   138 SSDDGSQSGVTILEEERRGGAAAASLFTIDSILGSRQQGGGTAPSQGSHISSNGNQNGLTSNGIS 202
            ::::.:.|...|.||..|..:.:::.........:.|...|.:||.....|.:|  .|:.|.|:
  Fly    30 NNNNNNHSPKEIPEETGRSSSTSSNSIPNAHRTNAGQHLLGGSPSSACSTSVSG--CGMPSEGL- 91

  Fly   203 LGLKRSGAESPASPNSNSSSSAAASPIRPQ--RVP---AMLQH--PGLH---------------- 244
                        .|.:.....|||:.:.|.  |||   ..||.  ||:.
  Fly    92 ------------HPTAALQLYAAAAQLAPNGVRVPPWGPFLQFGVPGVFGPNGPFLGRPRFDAAS 144

  Fly   245 -LGH----LAAAAASGFAASPSDFLVAYPNFYPNY--MHAAAVAHVAAAQMQAHVSGAAAGLS-- 300
             .||    .|||||:..||      |...|.:.|.  :.|||:.:|:|||..| |:..|:.::
  Fly   145 AGGHPNSAAAAAAATQMAA------VNASNAFANLTGLSAAALRNVSAAQTTA-VAAVASTVATI 202

  Fly   301 GH----GHHPHHPHGHPHHPHLGAHHHGQHHLSHLGHGPPPK---RKRRHRTIFTEEQLEQLEAT 358
            .|    |:....|...|  |..|::..|    ...|.|....   ::||.||.|...|||:||..
  Fly   203 QHRLMIGNRQSLPPAGP--PSEGSNEDG----GFPGDGDDDSSAAKRRRSRTNFNSWQLEELERA 261

  Fly   359 FDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKWRKQ------------------------- 398
            |..:||||:.:||.||:::||||.||.|||:|||||.||:
  Fly   262 FSASHYPDIFMREALAMRLDLKESRVAVWFQNRRAKVRKREHTKKGPGRPAHNAQPQTCSGEPIP 326

  Fly   399 ----KREEQER------------LRKLQEEQCGSTTNGTTNSSSGTTSSTGNGSLTVKCPGSDHY 447
                |.:|:.|            .||||.:  |.|.:.....:...:....||:.:......|
  Fly   327 PNELKAKERARRRKKLAKAIDRQARKLQAK--GITVDLEALKAEYISQHKANGTFSDSDLEDD-- 387

  Fly   448 SAQLVHIKSDPNGYSDADESSD 469
                 .|:.|..|.:|:|:..|
  Fly   388 -----GIQIDVVGGTDSDDEGD 404

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gsc	NP_001137762.2	Homeodomain	341..397	CDD:459649	33/55 (60%)
unc-4	NP_573242.2	Homeodomain	244..300	CDD:459649	33/55 (60%)