Protein Alignment Gsc and B-H1

DIOPT Version :10

• Sequence 1: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Sequence 2: NP_523387.1
• Gene: B-H1 / 32724
• FlyBaseID: FBgn0011758
• Length: 544
• Species: Drosophila melanogaster
• Alignment Length: 354
• Identity: 93/354 - (26%)
• Similarity: 138/354 - (38%)
• Gaps: 98/354 - (27%)

  Fly   120 SVLQQQHAQH------------QQSQSQTPSSDDGSQSGVTILEEERR---------GGAAAASL 163
            |.|||||.||            ....|.|..|..||.:..:.:.:..|         .|:|||:.
  Fly    27 STLQQQHHQHHLHYGLQPPAVAHSIHSTTTMSSGGSTTTASGIGKPNRSRFMINDILAGSAAAAF 91

  Fly   164 FTIDSILGSRQQ----------------GGGTAPSQGSHISSNGNQNG---LTSNGISLGLKRSG 209
            :       .:||                .||::|   :|.::|.|.||   ..||...:|:..|.
  Fly    92 Y-------KQQQHHQQLHHHNNNNNSGSSGGSSP---AHSNNNNNINGDNCEASNVAGVGVLPSA 146

  Fly   210 AESPASPNSNSSSSAAASPIRPQRVPAMLQHPGLHLGHLAAAAASGFAASPSDFLVAYPNFYPNY 274
            ...| .|:         .|..|...|..|.||...|||. ...|.|...:.:.:..|....|...
  Fly   147 LHHP-QPH---------PPTHPHTHPHALMHPHGKLGHF-PPTAGGNGLNVAQYAAAMQQHYAAA 200

  Fly   275 MHAAAVAHVAAAQMQAHVSGAAAGLS----------GHGHHPHHPHG---------HPHHPHLGA 320
            ..|||..:.|||...|..:.||||::          |.|..|  |.|         |..:....:
  Fly   201 AAAAAARNNAAAAAAAAAAAAAAGVAAPPVDGGVDGGVGLAP--PAGGDLDDSSDYHEENEDCDS 263

  Fly   321 HHHGQHHLSHLGHGPP----------------PKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVL 369
            .:...|.:...|....                .|::|:.||.||:.||:.||.:|::..|..|..
  Fly   264 GNMDDHSVCSNGGKDDDGNSVKSGSTSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQE 328

  Fly   370 REQLALKVDLKEERVEVWFKNRRAKWRKQ 398
            |::||.|:||.:.:|:.|::|||.||::|
  Fly   329 RQELAHKLDLSDCQVKTWYQNRRTKWKRQ 357

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gsc	NP_001137762.2	Homeodomain	341..397	CDD:459649	25/55 (45%)
B-H1	NP_523387.1	Homeodomain	300..356	CDD:459649	25/55 (45%)