Protein Alignment Gsc and Gsc

DIOPT Version :9

• Sequence 1: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Sequence 2: NP_001178802.1
• Gene: Gsc / 317715
• RGDID: 631425
• Length: 256
• Species: Rattus norvegicus
• Alignment Length: 342
• Identity: 100/342 - (29%)
• Similarity: 128/342 - (37%)
• Gaps: 122/342 - (35%)

  Fly   161 ASLFTIDSILGSRQQGGGTAPSQGSHISSNGNQNGLTSNGISLGLKRSGAESPASPNSNSSSSAA 225
            ||:|:||:||.:|.                               :...|..|.:|       :|
  Rat     3 ASMFSIDNILAARP-------------------------------RCKDAVLPVAP-------SA 29

  Fly   226 ASPIRPQRVPAMLQHPGLHLGHLAAAAASGFAASPSDFLVAYPN------------------FYP 272
            |:|:         ..|.|| |.....|..|   :.||:...||.                  .|.
  Rat    30 AAPV---------VFPALH-GDSLYGAGGG---TSSDYGAFYPRPVAPGGAGLPAAVGGSRLGYN 81

  Fly   273 NYMHAAAVAHVAAAQMQAHVSGAA--------------AGLSGHGHHPHHPHGHPHHPHLGAHHH 323
            :|.:..  .||.||.:.....||.              .|..|.|.....|..|...|::.....
  Rat    82 SYFYGQ--LHVQAAPVGPACCGAVPPLGAQQCSCVPTPPGYEGPGSVLVSPVPHQMLPYMNVGTL 144

  Fly   324 GQHHLSHLG--HGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEV 386
            .:..|..|.  |   .:||||||||||:||||.||..|.:|.||||..|||||.||.|:||:|||
  Rat   145 SRTELQLLNQLH---CRRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEV 206

  Fly   387 WFKNRRAKWRKQKREEQERLRKLQEEQCGSTTNGTTNSSSGTTSSTGNGSLTVKCPGSDHYSAQL 451
            ||||||||||:|||...|      |.:.....|.|::.:|..
  Rat   207 WFKNRRAKWRRQKRSSSE------ESENAEKWNKTSSKASPE----------------------- 242

  Fly   452 VHIKSDPNGYSDADESS 468
               |.:..|.||.|..|
  Rat   243 ---KREEEGKSDLDSDS 256

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gsc	NP_001137762.2	Homeobox	343..396	CDD:278475	39/52 (75%)
Gsc	NP_001178802.1	Homeobox	163..217	CDD:395001	29/55 (53%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	91	1.000	Domainoid score	I7508
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000011
OrthoInspector	1	1.000	-	-		otm45360
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.910