Protein Alignment Gsc and gsc

DIOPT Version :10

• Sequence 1: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Sequence 2: NP_571092.1
• Gene: gsc / 30212
• ZFINID: ZDB-GENE-980528-2060
• Length: 240
• Species: Danio rerio
• Alignment Length: 296
• Identity: 92/296 - (31%)
• Similarity: 120/296 - (40%)
• Gaps: 98/296 - (33%)

  Fly   161 ASLFTIDSILGSRQQGGGT------APSQGSHISSN-----GNQNGLTSNGISLGLKRSGAESPA 214
            |.:|:|||||..|.....:      ||...|:::.:     |:.|||.|:           ..|.
Zfish     3 AGMFSIDSILAGRPSCKDSVLLHRNAPVVFSNLTESLYTAAGDFNGLYSH-----------TGPP 56

  Fly   215 SPNSNSSSSAAASPIRPQRVPAMLQHPGLHLGHLAAAAASGFAASPSDFLVAYPNFYPNYMHAAA 279
            :||..|.:..                                        :.|.|:|...:|...
Zfish    57 APNLQSVNGR----------------------------------------IGYNNYYYGQLHVQG 81

  Fly   280 VAHVAAAQMQAHVSGAAAGLSGHGHHPHHPHGH-----------PH----HPHLGAHHHGQHHLS 329
            ....|..       ||...| |....|..|.|:           ||    :.::|.....:..|.
Zfish    82 PTGPACC-------GAIPTL-GSQQCPCIPTGYDSAGSVLISPVPHQMMSYMNVGTLSRTELQLL 138

  Fly   330 HLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAK 394
            :..|   .:||||||||||:||||.||..|.:|.||||..|||||.||.|:||:|||||||||||
Zfish   139 NQLH---CRRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAK 200

  Fly   395 WRKQKREEQERLRKLQEEQCGSTTNGTTNSSSGTTS 430
            ||:|||...|.....|:          .|.|:.|||
Zfish   201 WRRQKRSSSEESENSQK----------WNKSTKTTS 226

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gsc	NP_001137762.2	Homeodomain	341..397	CDD:459649	42/55 (76%)
gsc	NP_571092.1	Homeodomain	147..203	CDD:459649	42/55 (76%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	199..240		14/38 (37%)