Protein Alignment Gsc and Mixl1

DIOPT Version :10

• Sequence 1: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Sequence 2: XP_063128236.1
• Gene: Mixl1 / 289311
• RGDID: 1310011
• Length: 245
• Species: Rattus norvegicus
• Alignment Length: 260
• Identity: 68/260 - (26%)
• Similarity: 91/260 - (35%)
• Gaps: 81/260 - (31%)

  Fly   222 SSAAASPIRPQRVPAMLQHPGLHLGHL--AAAAASGFAASPSDFLVAYPNFYPNYMHAAAVAHVA 284
            :..||.|..|      ..|||   |.|  ||..|:|...:|.|
  Rat    12 AEGAAFPTFP------AAHPG---GQLLPAARPATGLPPAPPD---------------------- 45

  Fly   285 AAQMQAHVSGAAAGLSGHGHHP--HHPHG-HPHHPHLGAHHHGQHHLSHLGHGPPPKRKRRHRTI 346
                 :....|.......|..|  ..|.| .|..|..|:             ..|...:||.||.
  Rat    46 -----SRAPAATPCFPSRGPRPAAQTPTGLDPPGPSKGS-------------AAPSAPQRRKRTS 92

  Fly   347 FTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERV--------------EVWFKNRRAKWRK 397
            |:.|||:.||..|.:|.|||:.|||:||....|.|.|:              :|||:|||||.|:
  Rat    93 FSSEQLQLLELVFRQTMYPDIHLRERLAALTLLPESRIQLNSFFFFFNPLVPQVWFQNRRAKSRR 157

  Fly   398 QKREEQERLRKLQEEQCGSTTNGTTN-------------SSSGTTSSTGNGSLTVKCPGSDHYSA 449
            |..:..:.|...:|:.......||..             :....:|..|.|..|....|.:.||:
  Rat   158 QSGKSFQPLSSRREDFLHRPAPGTEARCLKPQLPLEADVNHVLDSSMAGGGVCTSGSQGFETYSS 222

  Fly   450  449
              Rat   223  222

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gsc	NP_001137762.2	Homeodomain	341..397	CDD:459649	31/69 (45%)
Mixl1	XP_063128236.1	None