Protein Alignment Gsc and ind

DIOPT Version :10

• Sequence 1: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Sequence 2: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Alignment Length: 371
• Identity: 81/371 - (21%)
• Similarity: 123/371 - (33%)
• Gaps: 121/371 - (32%)

  Fly    91 SPGN--TAAYHLTTAMLLNS-----QQCGYLGQRLQSVLQQQHAQHQQSQSQTPSSDDGSQSGVT 148
            |||.  |||..:..|.:|.|     ....|:|..|.|:..||..|.||.|.|..::...:.:...
  Fly    26 SPGGSPTAAAAVAAAAMLPSIPMLPYPASYVGSYLFSLGIQQQQQQQQQQQQHAAAAAAAAAAAA 90

  Fly   149 ILEEERRGGAAAASLF-TIDSILGSRQQGGGTAPSQGSHISSNGNQNGLTSNGISLGLKRSGAES 212
            .|::.....::..||: ....:..|:::..|.:..:|.:.|                       .
  Fly    91 ALQQHPHVSSSPGSLYHPYAQLFASKRKSSGFSNYEGCYPS-----------------------P 132

  Fly   213 PASPNSNSSSSAAASPIRPQRVPAMLQHPGLH-------LGHLAAAAASGFAASPSDFLVAYPNF 270
            |.|.|.||.                 |.|.:|       :|.|.......|..|||
  Fly   133 PLSANPNSQ-----------------QLPPIHNLYGSPVVGGLPLPEPGSFCTSPS--------- 171

  Fly   271 YPNYMHAAAVAHVAAAQMQAHVSGAAAGLSGHGHHP------HHPHGHPHHPHLGAHHHGQHHLS 329
                                ..|.|:...:.:...|      |.....|:...|..|..|
  Fly   172 --------------------ASSSASLDYTNNFDEPQGKRFKHESSCSPNSSPLKNHSSG----- 211

  Fly   330 HLGHGPP---------PKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVE 385
                ||.         ....:|.||.||..||.:||..|....|...:.|.::|.::.|.|::|:
  Fly   212 ----GPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVK 272

  Fly   386 VWFKNRRAKWRKQKREEQERLRKLQEEQCGSTTNGTTNSSSGTTSS 431
            :||:|||.|.:|...|             ..|.|.:|||:....:|
  Fly   273 IWFQNRRVKQKKGGSE-------------SPTFNLSTNSNGSPQAS 305

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gsc	NP_001137762.2	Homeodomain	341..397	CDD:459649	22/55 (40%)
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	22/55 (40%)