Protein Alignment Gsc and Prop1

DIOPT Version :10

• Sequence 1: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Sequence 2: NP_705891.1
• Gene: Prop1 / 266738
• RGDID: 628759
• Length: 223
• Species: Rattus norvegicus
• Alignment Length: 145
• Identity: 52/145 - (35%)
• Similarity: 67/145 - (46%)
• Gaps: 27/145 - (18%)

  Fly   328 LSHLGHGPP--------PKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERV 384
            ||..|.|.|        |..:|||||.|...||.|||:.|.:..|||:.:||.||....|.|.|:
  Rat    46 LSGTGLGRPKLCPQRGRPHSRRRHRTTFNPAQLGQLESAFGRNQYPDIWVREGLAQDTGLSEARI 110

  Fly   385 EVWFKNRRAKWRKQKREEQERLRKLQEEQCGSTTNGTTNSSSGTTSSTGNGSLTVKCPGSDHYSA 449
            :|||:|||||.|||:|               |....|.:.|..|.|    |.|:...|....|:.
  Rat   111 QVWFQNRRAKQRKQER---------------SLLQPTAHLSPATFS----GFLSESSPYPYTYTT 156

  Fly   450 QLVHIKSDPNGYSDA 464
            ....:...|:.|:.|
  Rat   157 PPPPVPCFPHPYNHA 171

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gsc	NP_001137762.2	Homeodomain	341..397	CDD:459649	30/55 (55%)
Prop1	NP_705891.1	Homeodomain	67..123	CDD:459649	30/55 (55%)