Protein Alignment Gsc and lim-4

DIOPT Version :9

• Sequence 1: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Sequence 2: NP_508669.1
• Gene: lim-4 / 180672
• WormBaseID: WBGene00002987
• Length: 355
• Species: Caenorhabditis elegans
• Alignment Length: 118
• Identity: 35/118 - (29%)
• Similarity: 50/118 - (42%)
• Gaps: 21/118 - (17%)

  Fly   325 QHHLSHL----GHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVE 385
            ||.|..:    |......:.:|.||.|.|:||..|:..|::...||....|::|....|.:...:
 Worm   220 QHFLELVEGDSGVSSQKAKTKRVRTTFAEDQLSVLQTYFNRDSNPDGADLEKIASMTGLSKRVTQ 284

  Fly   386 VWFKNRRAKWRK--QKREEQERLRKLQEEQCGSTTNGTTNSSSGTTSSTGNGS 436
            |||:|.||:.:|  ||.|..               ||.:..||...||....|
 Worm   285 VWFQNSRARQKKWHQKSEGD---------------NGDSQRSSVGPSSPSQKS 322

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gsc	NP_001137762.2	Homeobox	343..396	CDD:278475	19/52 (37%)
lim-4	NP_508669.1	LIM	98..153	CDD:278823
		LIM2_AWH	168..222	CDD:188765	1/1 (100%)
		HOX	239..295	CDD:197696	20/55 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R6207
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.940