Protein Alignment Gsc and ceh-17

DIOPT Version :10

• Sequence 1: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Sequence 2: NP_491393.1
• Gene: ceh-17 / 172059
• WormBaseID: WBGene00000440
• Length: 237
• Species: Caenorhabditis elegans
• Alignment Length: 247
• Identity: 70/247 - (28%)
• Similarity: 116/247 - (46%)
• Gaps: 52/247 - (21%)

  Fly   174 QQGGG---TAPSQGSHISSNGNQNGLTSNGISLGLKRSGAESPASPNSNSSSSAAASPIRPQRVP 235
            ||.|.   ||||..::......|:....:..:....:||.....:.|::|||:..::.
 Worm    16 QQSGDVPTTAPSAVTNSFFYTPQSHNIYHQYATPYLQSGRALTTAHNTSSSSAGNSTS------- 73

  Fly   236 AMLQHPGLHLGHLAAAAASGFAASPSDFLVAYPNFYPNYMHAAAVAHVAAAQMQAHVSGAAAGLS 300
                         :::::|.:..:..|.|.|:.|....|........:.:..:|...|....||
 Worm    74 -------------SSSSSSNYRNTTHDSLQAFFNTGLQYQLYQKSQLIGSDTIQRTSSNVLNGL- 124

  Fly   301 GHGHHPHHPHGHPHHPHLGAHHHGQHHLSHLGHGP--PPKRK--RRHRTIFTEEQLEQLEATFDK 361
                        |....:||       |...|..|  |.:|:  ||.||.||..||::||.:|.:
 Worm   125 ------------PRSSLVGA-------LCSTGGAPLNPAERRKQRRIRTTFTSGQLKELERSFCE 170

  Fly   362 THYPDVVLREQLALKVDLKEERVEVWFKNRRAKWRKQKREEQERLRKLQEEQ 413
            |||||:..||::|:::||.|.||:|||:|||||:||     ||::|::::|:
 Worm   171 THYPDIYTREEIAMRIDLTEARVQVWFQNRRAKYRK-----QEKIRRVKDEE 217

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gsc	NP_001137762.2	Homeodomain	341..397	CDD:459649	32/55 (58%)
ceh-17	NP_491393.1	DLL_N	19..112	CDD:463567	18/112 (16%)
		Homeodomain	150..206	CDD:459649	32/55 (58%)