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Protein Alignment Gsc and Lhx6
DIOPT Version :9
Sequence 1: | NP_001137762.2 |
Gene: | Gsc / 33240 |
FlyBaseID: | FBgn0010323 |
Length: | 473 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_032526.2 |
Gene: | Lhx6 / 16874 |
MGIID: | 1306803 |
Length: | 392 |
Species: | Mus musculus |
Alignment Length: | 155 |
Identity: | 41/155 - (26%) |
Similarity: | 62/155 - (40%) |
Gaps: | 52/155 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 337 PKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKWRKQKRE 401
||..:|.||.||.|||:.::|.|.:.:.||....::||....|....::|||:|.||:.:|...:
Mouse 245 PKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQ 309
Fly 402 ---------------------------EQERLRKLQEEQCGSTTNGTTNSSSGTTSSTGNGSLTV 439
..||.|.: |.:|...|. |
Mouse 310 HPVPPSGAPPTRLPSALSDDIHYSPFSSPERARMV-------TLHGYIESQ-------------V 354
Fly 440 KCPGSDH----YSAQLVHIKSDPNG 460
:| |..| |:|..||:|:|.:|
Mouse 355 QC-GQVHCRLPYTAPPVHLKADLDG 378
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R6207 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.030 |
|
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