Sequence 1: | NP_001137762.2 | Gene: | Gsc / 33240 | FlyBaseID: | FBgn0010323 | Length: | 473 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001165081.1 | Gene: | LDB3 / 11155 | HGNCID: | 15710 | Length: | 732 | Species: | Homo sapiens |
Alignment Length: | 427 | Identity: | 94/427 - (22%) |
---|---|---|---|
Similarity: | 138/427 - (32%) | Gaps: | 151/427 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 TTTTTPSTT--PDIPPSKAKFKITVVS--TPSPSP--------PPTP------------PPAGSM 55
Fly 56 LAQMVETNSPPAGYTLKRSPSD----LGEQQQP----PRQISRSPGNTAAYHLTTAMLLNSQQCG 112
Fly 113 YLGQRLQSVLQQQ--------HAQHQQSQSQTPSS-DDGSQSGVTILEEERRGGAAA-------- 160
Fly 161 -ASLFTIDSILGSRQQGGGTAPSQGSHISSN-------------------GNQN----------- 194
Fly 195 ---GLTSNGISLGLKRSGAE----------------------------SPASPNSNSSSSAAASP 228
Fly 229 ---------IRP---QRVPAMLQHPGLHLGH----LAAAAASGFAASPSDFLVAY-PNFYPNYMH 276
Fly 277 AAAVAHVAAAQMQAHVSGAAAGLSGHGHHPHHPHGHP 313 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Gsc | NP_001137762.2 | Homeobox | 343..396 | CDD:278475 | |
LDB3 | NP_001165081.1 | PDZ_signaling | 5..81 | CDD:238492 | |
DUF4045 | <77..180 | CDD:330572 | 28/89 (31%) | ||
ZM | 189..214 | CDD:128974 | 6/35 (17%) | ||
DUF4749 | 263..353 | CDD:318205 | 14/92 (15%) | ||
Atrophin-1 | <387..554 | CDD:331285 | 28/114 (25%) | ||
LIM1_ZASP_Cypher | 556..607 | CDD:188838 | |||
LIM2_Enigma_like | 615..666 | CDD:188748 | |||
LIM3_Enigma_like | 674..727 | CDD:188749 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R6207 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |