Protein Alignment Gsc and uncx

DIOPT Version :10

• Sequence 1: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Sequence 2: NP_001305673.1
• Gene: uncx / 100492016
• XenbaseID: XB-GENE-920201
• Length: 483
• Species: Xenopus tropicalis
• Alignment Length: 281
• Identity: 80/281 - (28%)
• Similarity: 119/281 - (42%)
• Gaps: 88/281 - (31%)

  Fly   237 MLQHPGLHLGHLAAAAASGFAASPSDFLVAYPNFYPNYMHAAAVAHVAAAQMQAHVSGAAAGLSG 301
            :|:||....|    .:.||        :|.:|  ||...|  .|..:|:.|:|:..:.....:.|
 Frog     6 ILEHPHAQFG----GSMSG--------MVGFP--YPLGHH--HVYELASHQLQSAAAAVPFSIDG 54

  Fly   302 --HGH--------HPHHPHGHPHHPHLGAHHHGQHHLSHLGHGP----PPKRKRRHRTIFTEEQL 352
              :|.        .|..|.|      .|.:...|.:.......|    |..::||.||.||..||
 Frog    55 LLNGSCTASVINPTPLLPSG------CGLNGDSQQYKLSDSIDPDKESPGCKRRRTRTNFTGWQL 113

  Fly   353 EQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKWRKQKR----------------- 400
            |:||..|:::|||||.:||.|||::||.|.||:|||:||||||||::.
 Frog   114 EELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQNRRAKWRKKENTKKGPGRPAHNSHPTTC 178

  Fly   401 ---------------EEQERLRKLQEEQCGSTTNGTTNSSSGTTSSTGNGSLTVKCPGSDHYSAQ 450
                           |:.|:.::.||::.....|...:|.         |.:::..|.||
 Frog   179 SGEPMDPEEIARKELEKMEKKKRKQEKKMLRNQNRLQHSP---------GDMSLHTPSSD----- 229

  Fly   451 LVHIKSDPNGYSDADESSDLE 471
                 || :|.|...:||.||
 Frog   230 -----SD-SGLSQNLDSSSLE 244

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gsc	NP_001137762.2	Homeodomain	341..397	CDD:459649	36/55 (65%)
uncx	NP_001305673.1	homeobox domain	101..160		38/58 (66%)
		Homeodomain	102..158	CDD:459649	36/55 (65%)